I don't quite remember the sysinstall menus off by hand, but I believe that he is reinstalling the FreeBSD "core" via the "standard","express", or "custom" options.
You should only sysinstall for "configure" and "upgrade". Typically "Fix It" is used in single user mode because you can't do too much when mounted/booted up. I have done this when I was new that's why it's ringing a few bells.
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